bio_assembly_refinement

Summary

Assembly refinement tools, mostly useful for (but not limited to) pacbio bacterial assemblies

Versions

  • 0.5.0

License

GPLv3

Meta

package:
  name: bio_assembly_refinement
  version: "0.5.0"

source:
  fn: bio_assembly_refinement-0.5.0.tar.gz
  url: https://pypi.python.org/packages/source/b/bio_assembly_refinement/bio_assembly_refinement-0.5.0.tar.gz
  md5: 93657bf827b05d033fd33215ace8e197
#  patches:
   # List any patch files here
   # - fix.patch

build:
  skip: True # [py27]
  # noarch_python: True
  # preserve_egg_dir: True
  # entry_points:
    # Put any entry points (scripts to be generated automatically) here. The
    # syntax is module:function.  For example
    #
    # - bio_assembly_refinement = bio_assembly_refinement:main
    #
    # Would create an entry point called bio_assembly_refinement that calls bio_assembly_refinement.main()


  # If this is a new build for the same version, increment the build
  # number. If you do not include this key, it defaults to 0.
  # number: 1

requirements:
  build:
    - python
    - setuptools
    - pyfastaq >=3.10.0
    - pymummer

  run:
    - python
    - pyfastaq >=3.10.0
    - pymummer

test:
  # Python imports
  imports:
    - bio_assembly_refinement

  # commands:
    # You can put test commands to be run here.  Use this to test that the
    # entry points work.


  # You can also put a file called run_test.py in the recipe that will be run
  # at test time.

  requires:
    - nose >=1.3
    # Put any additional test requirements here.  For example
    # - nose

about:
  home: https://github.com/nds/bio_assembly_refinement
  license: GPLv3
  summary: 'Assembly refinement tools, mostly useful for (but not limited to) pacbio bacterial assemblies'

# See
# http://docs.continuum.io/conda/build.html for
# more information about meta.yaml