bioconductor-csaw

Summary

Detection of differentially bound regions in ChIP-seq data with sliding windows, with methods for normalization and proper FDR control.

Versions

  • 1.4.1

License

GPL-3

Meta

package:
  name: bioconductor-csaw
  version: 1.4.1
source:
  fn: csaw_1.4.1.tar.gz
  url: http://bioconductor.org/packages/release/bioc/src/contrib/csaw_1.4.1.tar.gz
  md5: 7ee43d43873dfa4f89d16d38563bd4b0
build:
  number: 0
  rpaths:
    - lib/R/lib/
    - lib/
requirements:
  build:
    - bioconductor-annotationdbi
    - bioconductor-edger
    - bioconductor-genomeinfodb
    - bioconductor-genomicalignments
    - bioconductor-genomicfeatures
    - bioconductor-genomicranges
    - bioconductor-iranges
    - bioconductor-limma
    - bioconductor-rsamtools
    - bioconductor-s4vectors
    - bioconductor-summarizedexperiment
    - 'r >=3.2.0'
  run:
    - bioconductor-annotationdbi
    - bioconductor-edger
    - bioconductor-genomeinfodb
    - bioconductor-genomicalignments
    - bioconductor-genomicfeatures
    - bioconductor-genomicranges
    - bioconductor-iranges
    - bioconductor-limma
    - bioconductor-rsamtools
    - bioconductor-s4vectors
    - bioconductor-summarizedexperiment
    - 'r >=3.2.0'
test:
  commands:
    - '$R -e "library(''csaw'')"'
about:
  home: http://bioconductor.org/packages/release/bioc/html/csaw.html
  license: GPL-3
  summary: 'Detection of differentially bound regions in ChIP-seq data with sliding
    windows, with methods for normalization and proper FDR control.'