bioconductor-deseq

Summary

Estimate variance-mean dependence in count data from high-throughput sequencing assays and test for differential expression based on a model using the negative binomial distribution

Versions

  • 1.22.1

License

GPL (>= 3)

Meta

package:
  name: bioconductor-deseq
  version: 1.22.1
source:
  fn: DESeq_1.22.1.tar.gz
  url: http://bioconductor.org/packages/release/bioc/src/contrib/DESeq_1.22.1.tar.gz
  md5: c33cdeda38e731efd8f424502da1eaa6
build:
  number: 0
  rpaths:
    - lib/R/lib/
    - lib/
requirements:
  build:
    - 'bioconductor-biobase >=2.21.7'
    - 'bioconductor-biocgenerics >=0.7.5'
    - bioconductor-genefilter
    - bioconductor-geneplotter
    - r
    - r-locfit
    - r-rcolorbrewer
  run:
    - 'bioconductor-biobase >=2.21.7'
    - 'bioconductor-biocgenerics >=0.7.5'
    - bioconductor-genefilter
    - bioconductor-geneplotter
    - r
    - r-locfit
    - r-rcolorbrewer
test:
  commands:
    - '$R -e "library(''DESeq'')"'
about:
  home: http://bioconductor.org/packages/release/bioc/html/DESeq.html
  license: 'GPL (>= 3)'
  summary: 'Estimate variance-mean dependence in count data from high-throughput sequencing
    assays and test for differential expression based on a model using the negative
    binomial distribution'