bioconductor-genomeinfodb

Summary

Contains data and functions that define and allow translation between different chromosome sequence naming conventions (e.g., “chr1” versus “1”), including a function that attempts to place sequence names in their natural, rather than lexicographic, order.

Versions

  • 1.6.1

License

Artistic-2.0

Meta

package:
  name: bioconductor-genomeinfodb
  version: 1.6.1
source:
  fn: GenomeInfoDb_1.6.1.tar.gz
  url: http://bioconductor.org/packages/release/bioc/src/contrib/GenomeInfoDb_1.6.1.tar.gz
  md5: 993d970ab69d0a739f15f9ab44658672
build:
  number: 0
  rpaths:
    - lib/R/lib/
    - lib/
requirements:
  build:
    - 'bioconductor-biocgenerics >=0.13.8'
    - 'bioconductor-iranges >=1.99.26'
    - 'bioconductor-s4vectors >=0.7.11'
    - 'r >=3.1'
  run:
    - 'bioconductor-biocgenerics >=0.13.8'
    - 'bioconductor-iranges >=1.99.26'
    - 'bioconductor-s4vectors >=0.7.11'
    - 'r >=3.1'
test:
  commands:
    - '$R -e "library(''GenomeInfoDb'')"'
about:
  home: http://bioconductor.org/packages/release/bioc/html/GenomeInfoDb.html
  license: Artistic-2.0
  summary: 'Contains data and functions that define and allow translation between
    different chromosome sequence naming conventions (e.g., "chr1" versus "1"), including
    a function that attempts to place sequence names in their natural, rather than
    lexicographic, order.'