bioconductor-rsamtools

Summary

This package provides an interface to the ‘samtools’, ‘bcftools’, and ‘tabix’ utilities (see ‘LICENCE’) for manipulating SAM (Sequence Alignment / Map), FASTA, binary variant call (BCF) and compressed indexed tab-delimited (tabix) files.

Versions

  • 1.22.0

License

Artistic-2.0 | file LICENSE

Meta

package:
  name: bioconductor-rsamtools
  version: 1.22.0
source:
  fn: Rsamtools_1.22.0.tar.gz
  url: https://bioarchive.galaxyproject.org/Rsamtools_1.22.0.tar.gz
  md5: 6643603c4570b7b8fbdb52c49e98c801
build:
  number: 1
  rpaths:
    - lib/R/lib/
    - lib/
requirements:
  build:
    - 'bioconductor-biocgenerics >=0.1.3'
    - bioconductor-biocparallel
    - 'bioconductor-biostrings >=2.37.1'
    - 'bioconductor-genomeinfodb >=1.1.3'
    - 'bioconductor-genomicranges >=1.21.6'
    - 'bioconductor-iranges >=2.3.7'
    - 'bioconductor-s4vectors >=0.7.11'
    - 'bioconductor-xvector >=0.9.1'
    - bioconductor-zlibbioc
    - r
    - r-bitops
  run:
    - 'bioconductor-biocgenerics >=0.1.3'
    - bioconductor-biocparallel
    - 'bioconductor-biostrings >=2.37.1'
    - 'bioconductor-genomeinfodb >=1.1.3'
    - 'bioconductor-genomicranges >=1.21.6'
    - 'bioconductor-iranges >=2.3.7'
    - 'bioconductor-s4vectors >=0.7.11'
    - 'bioconductor-xvector >=0.9.1'
    - bioconductor-zlibbioc
    - r
    - r-bitops
test:
  commands:
    - '$R -e "library(''Rsamtools'')"'
about:
  home: http://bioconductor.org/packages/release/bioc/html/Rsamtools.html
  license: 'Artistic-2.0 | file LICENSE'
  summary: 'This package provides an interface to the ''samtools'', ''bcftools'',
    and ''tabix'' utilities (see ''LICENCE'') for manipulating SAM (Sequence Alignment
    / Map), FASTA, binary variant call (BCF) and compressed indexed tab-delimited
    (tabix) files.'