chanjo

Summary

Coverage analysis tool for clinical sequencing

Versions

  • 3.1.1

License

MIT

Meta

package:
  name: chanjo
  version: "3.1.1"

source:
  fn: chanjo-3.1.1.tar.gz
  url: https://pypi.python.org/packages/source/c/chanjo/chanjo-3.1.1.tar.gz
  md5: 23a691d5e6f23e99901d77493e8597e6

build:
  preserve_egg_dir: True
  entry_points:
    - chanjo = chanjo.__main__:root_command

  # If this is a new build for the same version, increment the build
  # number. If you do not include this key, it defaults to 0.
  # number: 1

requirements:
  build:
    - python
    - click
    - setuptools
    - toolz
    - path.py
    - pyyaml
    - sqlalchemy >=0.8.2

  run:
    - python
    - click
    - setuptools
    - toolz
    - path.py
    - pyyaml
    - sqlalchemy >=0.8.2
    - sambamba

test:
  # Python imports
  imports:
    - chanjo
    - chanjo.annotate
    - chanjo.annotate.sambamba
    - chanjo.bootstrap
    - chanjo.cli
    - chanjo.config
    - chanjo.demo
    - chanjo.load
    - chanjo.parse
    - chanjo.parse.bed
    - chanjo.parse.sambamba
    - chanjo.sex
    - chanjo.store

  commands:
    # You can put test commands to be run here.  Use this to test that the
    # entry points work.

    - chanjo --help

  # You can also put a file called run_test.py in the recipe that will be run
  # at test time.

  requires:
    - pytest

about:
  home: http://www.chanjo.co/
  license: MIT
  license_file: LICENSE
  summary: 'Coverage analysis tool for clinical sequencing'

# See
# http://docs.continuum.io/conda/build.html for
# more information about meta.yaml