extract_fullseq¶

Summary¶

extract_fullseq is part of BMTagger aka Best Match Tagger, for removing human reads from metagenomics datasets

Home¶

ftp://ftp.ncbi.nlm.nih.gov/pub/agarwala/bmtagger/

Versions¶

3.101

License¶

Public Domain

Meta¶

package:
    name: extract_fullseq
    version: 3.101
source:
    fn: bmtools.tar.gz # [linux]
    url: ftp://ftp.ncbi.nlm.nih.gov/pub/agarwala/bmtagger/bmtools.tar.gz # [linux]
    md5: 719474a0e3b54449cbe06f6e442994dd # [linux]
    fn: extract_fullseq # [osx]
    url: ftp://ftp.ncbi.nlm.nih.gov/pub/agarwala/bmtagger/mac-os/extract_fullseq # [osx]
build:
    number: 1
requirements:
  build:
    #- blast
    #- srprism
  run:
    #- blast
    #- srprism
#test:
#    commands:
#        - extract_fullseq # not so easy to test
about:
    home: ftp://ftp.ncbi.nlm.nih.gov/pub/agarwala/bmtagger/
    license: Public Domain
    summary: "extract_fullseq is part of BMTagger aka Best Match Tagger, for removing human reads from metagenomics datasets"