fastq-screen

Summary

FastQ Screen allows you to screen a library of sequences in FastQ format against a set of sequence databases so you can see if the composition of the library matches with what you expect

Home

http://www.bioinformatics.babraham.ac.uk/projects/fastq_screen/

Versions

• 0.5.2

License

GPLv3

Meta

about:
  home: 'http://www.bioinformatics.babraham.ac.uk/projects/fastq_screen/'
  license: GPLv3
  summary: 'FastQ Screen allows you to screen a library of sequences in FastQ format against a set of sequence databases so you can see if the composition of the library matches with what you expect'

build:
  number: 0

requirements:
  build:
    - bowtie
    - bowtie2
    - perl >=5.22.0
    - perl-gdgraph
  run:
    - bowtie
    - bowtie2
    - perl >=5.22.0
    - perl-gdgraph
package:
  name: fastq-screen
  version: '0.5.2'
source:
  fn: fastq_screen_v0.5.2.tar.gz
  url: http://www.bioinformatics.babraham.ac.uk/projects/fastq_screen/fastq_screen_v0.5.2.tar.gz
  patches:
    - env-perl.patch
test:
  commands:
    - 'fastq_screen -h'