jellyfish

Summary

Jellyfish is a tool for fast, memory-efficient counting of k-mers in DNA. A k-mer is a substring of length k, and counting the occurrences of all such substrings is a central step in many analyses of DNA sequence

Versions

  • 2.2.3
  • 1.1.11

License

GPLv3

Meta

package:
  name: jellyfish
  version: "2.2.3"
source:
  fn: v2.2.3.tar.gz
  url: https://github.com/gmarcais/Jellyfish/archive/v2.2.3.tar.gz
  md5: a63398ce1cbde0eddcb3493f5b84a9b7
requirements:
  build:
    - yaggo >=1.5.8
  run:
test:
  commands:
    - jellyfish --version 2>&1 > /dev/null
about:
  home: http://www.genome.umd.edu/jellyfish.html
  license: GPLv3
  summary: Jellyfish is a tool for fast, memory-efficient counting of k-mers in DNA. A k-mer is a substring of length k, and counting the occurrences of all such substrings is a central step in many analyses of DNA sequence