mageck-vispr

Summary

MAGeCK-VISPR is a comprehensive quality control, analysis and visualization workflow for CRISPR/Cas9 screens based on MAGeCK, VISPR, Snakemake, FastQC and cutadapt.

Versions

  • 0.4.7

License

MIT License

Meta

package:
  name: mageck-vispr
  version: "0.4.7"

source:
  git_url: https://bitbucket.org/liulab/mageck-vispr.git
  git_rev: v0.4.7

build:
  skip: True  # [py27]
  entry_points:
    - mageck-vispr = mageck_vispr.cli:main

requirements:
  build:
    - python
    - setuptools
    - snakemake
    - mageck >=0.5.3
    - vispr >=0.4.4
    - fastqc
    - cutadapt
    - jinja2
  run:
    - python
    - setuptools
    - snakemake
    - mageck >=0.5.3
    - vispr >=0.4.4
    - fastqc
    - cutadapt
    - jinja2

test:
  commands:
    - mageck-vispr --help > /dev/null

about:
  home: https://bitbucket.org/liulab/mageck-vispr
  license: MIT License
  summary: MAGeCK-VISPR is a comprehensive quality control, analysis and visualization workflow for CRISPR/Cas9 screens based on MAGeCK, VISPR, Snakemake, FastQC and cutadapt.