metaseq

Summary

Integrative analysis of high-thoughput sequencing data

Versions

  • 0.5.6

License

MIT License

Meta

package:
  name: metaseq
  version: "0.5.6"

source:
  fn: metaseq-0.5.6.tar.gz
  url: https://pypi.python.org/packages/source/m/metaseq/metaseq-0.5.6.tar.gz
  md5: f29575db23019a5cd1003bfccb599847
#  patches:
   # List any patch files here
   # - fix.patch

build:
  # noarch_python: True
  # preserve_egg_dir: True
  # entry_points:
    # Put any entry points (scripts to be generated automatically) here. The
    # syntax is module:function.  For example
    #
    # - metaseq = metaseq:main
    #
    # Would create an entry point called metaseq that calls metaseq.main()


  # If this is a new build for the same version, increment the build
  # number. If you do not include this key, it defaults to 0.
  number: 0
  skip: True # [not py27]

requirements:
  build:
    - python
    - setuptools
    - scipy >=0.10.1
    - biopython
    - scikit-learn
    - bx-python >=0.7.1
    - cython
    - numpy >=1.8.0
    - matplotlib >=1.3.1
    - pandas >=0.13.1
    - pysam >=0.7
    - gffutils >=0.8.2
    - pyyaml >=3.10
    - pybedtools >=0.6.6
    - fisher

  run:
    - python
    - scipy >=0.10.1
    - biopython
    - scikit-learn
    - bx-python >=0.7.1
    - cython
    - numpy >=1.8.0
    - matplotlib >=1.3.1
    - pandas >=0.13.1
    - pysam >=0.7
    - gffutils >=0.8.2
    - pyyaml >=3.10
    - pybedtools >=0.6.6
    - fisher

test:
  # Python imports
  imports:
    - metaseq

  # commands:
    # You can put test commands to be run here.  Use this to test that the
    # entry points work.


  # You can also put a file called run_test.py in the recipe that will be run
  # at test time.

  # requires:
    # Put any additional test requirements here.  For example
    # - nose

about:
  home: http://github.com/daler/metaseq
  license: MIT License
  summary: 'Integrative analysis of high-thoughput sequencing data'

# See
# http://docs.continuum.io/conda/build.html for
# more information about meta.yaml