pear

Summary

paired-end read merger

Versions

  • 0.9.6

License

Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported

Meta

package:
  name: pear
  version: '0.9.6'
about:
  home: http://sco.h-its.org/exelixis/web/software/pear/
  license: 'Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported'
  summary: 'paired-end read merger'
source:
  fn: pear-0.9.6-src.tar.gz
  md5: 5ed68d50c1620cd55c58681e38771799
  url: http://sco.h-its.org/exelixis/web/software/pear/files/pear-0.9.6-src.tar.gz
requirements:
  build:
    - pkgconfig
    - zlib
  run:
    - zlib
test:
  # 'pear -h' exits with error code 1 and there is no 'pear --version', so try
  # to actually merge something. That way, we can also test whether gzip support
  # is compiled in.
  files:
    - fwd.fastq.gz
    - rev.fastq.gz
  commands:
    - pear -f fwd.fastq.gz -r rev.fastq.gz -o out > /dev/null