r-gsalib

Summary

This package contains utility functions used by the Genome Analysis Toolkit (GATK) to load tables and plot data. The GATK is a toolkit for variant discovery in high-throughput sequencing data.

Home

Versions

  • 2.1

License

MIT + file LICENSE

Meta

package:
  name: r-gsalib
  # Note that conda versions cannot contain -, so any -'s in the version have
  # been replaced with _'s.
  version: "2.1"

source:
  fn: gsalib_2.1.tar.gz
  url:
    - http://cran.r-project.org/src/contrib/gsalib_2.1.tar.gz
    - http://cran.r-project.org/src/contrib/Archive/gsalib/gsalib_2.1.tar.gz


  # You can add a hash for the file here, like md5 or sha1
  # md5: 49448ba4863157652311cc5ea4fea3ea
  # sha1: 3bcfbee008276084cbb37a2b453963c61176a322
  # patches:
   # List any patch files here
   # - fix.patch

build:
  # If this is a new build for the same version, increment the build
  # number. If you do not include this key, it defaults to 0.
  # number: 1

  # This is required to make R link correctly on Linux.
  rpaths:
    - lib/R/lib/
    - lib/


requirements:
  build:
    - r

  run:
    - r

test:
  commands:
    # You can put additional test commands to be run here.
    - $R -e "library('gsalib')" # [not win]
    - "\"%R%\" -e \"library('gsalib')\"" # [win]

  # You can also put a file called run_test.py, run_test.sh, or run_test.bat
  # in the recipe that will be run at test time.

  # requires:
    # Put any additional test requirements here.

about:
  #home:
  license: MIT + file LICENSE
  summary: !!python/unicode 'This package contains utility functions used by the Genome Analysis
    Toolkit (GATK) to load tables and plot data. The GATK is a toolkit for variant discovery
    in high-throughput sequencing data.'


# The original CRAN metadata for this package was:

# Package: gsalib
# Type: Package
# Title: Utility Functions For GATK
# Version: 2.1
# Date: 2014-12-09
# Author: Kiran Garimella
# Maintainer: Geraldine Van der Auwera <vdauwera@broadinstitute.org>
# Description: This package contains utility functions used by the Genome Analysis Toolkit (GATK) to load tables and plot data. The GATK is a toolkit for variant discovery in high-throughput sequencing data.
# License: MIT + file LICENSE
# LazyLoad: yes
# Packaged: 2014-12-09 21:51:34 UTC; vdauwera
# NeedsCompilation: no
# Repository: CRAN
# Date/Publication: 2014-12-10 08:09:01

# See
# http://docs.continuum.io/conda/build.html for
# more information about meta.yaml