r-seqinr

Summary

Exploratory data analysis and data visualization for biological sequence (DNA and protein) data. Includes also utilities for sequence data management under the ACNUC system.

Versions

  • 3.1_3

License

GPL (>= 2)

Meta

package:
  name: r-seqinr
  # Note that conda versions cannot contain -, so any -'s in the version have
  # been replaced with _'s.
  version: "3.1_3"

source:
  fn: seqinr_3.1-3.tar.gz
  url:
    - http://cran.r-project.org/src/contrib/seqinr_3.1-3.tar.gz
    - http://cran.r-project.org/src/contrib/Archive/seqinr/seqinr_3.1-3.tar.gz


  # You can add a hash for the file here, like md5 or sha1
  # md5: 49448ba4863157652311cc5ea4fea3ea
  # sha1: 3bcfbee008276084cbb37a2b453963c61176a322
  # patches:
   # List any patch files here
   # - fix.patch

build:
  # If this is a new build for the same version, increment the build
  # number. If you do not include this key, it defaults to 0.
  # number: 1

  # This is required to make R link correctly on Linux.
  rpaths:
    - lib/R/lib/
    - lib/

# Suggests: segmented
requirements:
  build:
    - r
    - r-ade4

  run:
    - r
    - r-ade4

test:
  commands:
    # You can put additional test commands to be run here.
    - $R -e "library('seqinr')" # [not win]
    - "\"%R%\" -e \"library('seqinr')\"" # [win]

  # You can also put a file called run_test.py, run_test.sh, or run_test.bat
  # in the recipe that will be run at test time.

  # requires:
    # Put any additional test requirements here.

about:
  home: 'http://seqinr.r-forge.r-project.org/, Mailing list: http://r-forge.r-project.org/mail/?group_id=220'

  license: GPL (>= 2)
  summary: Exploratory data analysis and data visualization for biological sequence (DNA and
    protein) data.  Includes also utilities for sequence data management under the ACNUC
    system.

# The original CRAN metadata for this package was:

# Package: seqinr
# Version: 3.1-3
# Date: 2014-12-04
# Title: Biological Sequences Retrieval and Analysis
# Author: Delphine Charif and Jean R. Lobry and Anamaria Necsulea and Leonor Palmeira and Simon Penel and Guy Perriere
# Maintainer: Simon Penel <simon.penel@univ-lyon1.fr>
# Depends: ade4, R (>= 2.10.0)
# Suggests: segmented
# Description: Exploratory data analysis and data visualization for biological sequence (DNA and protein) data.  Includes also utilities for sequence data management under the ACNUC system.
# License: GPL (>= 2)
# SystemRequirements: zlib headers and library.
# URL: http://seqinr.r-forge.r-project.org/, Mailing list: http://r-forge.r-project.org/mail/?group_id=220
# ZipData: no
# LazyData: no
# Packaged: 2014-12-04 17:05:10 UTC; rforge
# NeedsCompilation: yes
# Repository: CRAN
# Date/Publication: 2014-12-17 18:03:07
# Repository/R-Forge/Project: seqinr
# Repository/R-Forge/Revision: 1835
# Repository/R-Forge/DateTimeStamp: 2014-12-04 17:02:49

# See
# http://docs.continuum.io/conda/build.html for
# more information about meta.yaml