snakemake

Summary

Snakemake is a workflow management system that aims to reduce the complexity of creating workflows by providing a fast and comfortable execution environment, together with a clean and modern specification language in python style. Snakemake workflows are essentially Python scripts extended by declarative code to define rules. Rules describe how to create output files from input files.

Versions

  • 3.5.5

License

MIT License

Meta

package:
  name: snakemake
  version: "3.5.5"
source:
  fn: snakemake-3.5.5.tar.gz
  url: https://pypi.python.org/packages/source/s/snakemake/snakemake-3.5.5.tar.gz
build:
  number: 1
  skip: True # [py27]
  entry_points:
    - snakemake = snakemake:main
    - snakemake-bash-completion = snakemake:bash_completion
requirements:
  build:
    - python
    - setuptools
  run:
    - python
    - docutils
    - pyyaml
test:
    imports:
      - snakemake
    commands:
      - snakemake --help > /dev/null
about:
  home: http://snakemake.bitbucket.org
  license: MIT License
  summary: 'Snakemake is a workflow management system that aims to reduce the complexity of creating workflows by providing a fast and comfortable execution environment, together with a clean and modern specification language in python style. Snakemake workflows are essentially Python scripts extended by declarative code to define rules. Rules describe how to create output files from input files.'