theta2

Summary

Estimate tumor purity and clonal/subclonal copy number aberrations directly from high-throughput DNA sequencing data

Versions

  • 0.7

License

Modified MIT (no inclusion in commercial tools)

Meta

package:
  name: theta2
  version: '0.7'
build:
  number: 0
  skip: True # [not py27]
source:
  fn: theta-0.7.tar.gz
  url: https://github.com/raphael-group/THetA/archive/v0.7.tar.gz

requirements:
  build:
    - python
    - numpy
    - scipy
    - matplotlib
    - joblib
    - numexpr
  run:
    - python
    - numpy
    - scipy
    - matplotlib
    - joblib
    - numexpr

test:
  commands:
    - RunTHetA.py -h

about:
  home: https://github.com/raphael-group/THetA
  license: Modified MIT (no inclusion in commercial tools)
  summary: Estimate tumor purity and clonal/subclonal copy number aberrations directly from high-throughput DNA sequencing data