ucsc-fatotwobit

Summary

Convert DNA from fasta to 2bit format

Versions

  • 324

License

varies; see http://genome.ucsc.edu/license

Meta

package:
  name: ucsc-fatotwobit
  version: 324
source:
  url: "http://hgdownload.cse.ucsc.edu/admin/exe/userApps.v324.src.tgz"  # [linux]
  fn: "userApps.src.tgz"                                                 # [linux]
  md5: "c49c168584c5917081d71df854e3cd9d"                                # [linux]
  patches:                                                               # [linux]
      - "include.patch"                                                  # [linux]
  url: http://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/faToTwoBit # [osx]
  fn: faToTwoBit                                                         # [osx]
build:
  number: 0
  script: "mkdir -p $PREFIX/bin; cp faToTwoBit $PREFIX/bin; chmod +x $PREFIX/bin/faToTwoBit" # [osx]
requirements:
  build:
    - libpng                                                    # [linux]
    - mysql                                                     # [linux]
    - zlib                                                      # [linux]
    - openssl                                                   # [linux]
  run:
    - libpng                                                    # [linux]
    - mysql                                                     # [linux]
    - zlib                                                      # [linux]
    - openssl                                                   # [linux]
test:
  commands:
    - faToTwoBit 2>&1 | grep faToTwoBit
about:
  home: "http://hgdownload.cse.ucsc.edu/admin/exe/"
  license: "varies; see http://genome.ucsc.edu/license"
  summary: Convert DNA from fasta to 2bit format