ucsc-gtftogenepred

Summary

convert a GTF file to a genePred

Versions

  • 324

License

varies; see http://genome.ucsc.edu/license

Meta

package:
  name: ucsc-gtftogenepred
  version: 324
source:
  url: "http://hgdownload.cse.ucsc.edu/admin/exe/userApps.v324.src.tgz"            # [linux]
  fn: "userApps.src.tgz"                                                           # [linux]
  md5: "c49c168584c5917081d71df854e3cd9d"                                          # [linux]
  patches:                                                                         # [linux]
      - "include.patch"                                                            # [linux]
  url: http://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/gtfToGenePred        # [osx]
  fn: gtfToGenePred                                                                # [osx]
build:
  number: 0
  script: "mkdir -p $PREFIX/bin; cp gtfToGenePred $PREFIX/bin; chmod +x $PREFIX/bin/gtfToGenePred" # [osx]
requirements:
  build:
    - libpng                                                    # [linux]
    - mysql                                                     # [linux]
    - zlib                                                      # [linux]
    - openssl                                                   # [linux]
  run:
    - libpng                                                    # [linux]
    - mysql                                                     # [linux]
    - zlib                                                      # [linux]
    - openssl                                                   # [linux]
test:
  commands:
    - gtfToGenePred 2>&1 | grep gtfToGenePred
about:
  home: "http://hgdownload.cse.ucsc.edu/admin/exe/"
  license: "varies; see http://genome.ucsc.edu/license"
  summary: convert a GTF file to a genePred